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Cancer Research

Cancer research demands cutting-edge imaging technologies to enhance biomarker discovery, tumor profiling, and immuno-oncology advancements. Traditional histopathology techniques, while fundamental, present challenges such as limited scalability, subjective interpretation, and data fragmentation. Digital Pathology and AI-powered digital pathology solutions offer a paradigm shift—enabling high-throughput, quantitative, and reproducible analysis of cancerous tissues.

This case study highlights how 3DHISTECH’s Pannoramic Digital Pathology solutions, Tissue Microarray (TMA) technologies, and Pannoramic-X Micro-CT scanning address key challenges in cancer, immunology, and infectious disease research, providing researchers with an integrated digital pathology workflow for precision oncology and translational medicine.

Key Challenges in Cancer Research & Digital Pathology

• Challenge: Cancer studies require high-throughput scanning of large tissue samples while maintaining superior resolution and fluorescence multiplexing.
• Solution: The Pannoramic Confocal, Scan II, 480, MIDI III, and Pannoramic 150 Digital Scanners provide high-resolution, multi-channel fluorescence, and confocal Z-stack imaging, enabling detailed analysis of tumor microenvironments, genetic mutations, and immune cell infiltration.

• Challenge: Conventional histology relies on 2D slides, which limit spatial understanding of tumor morphology and biomarker localization.
• Solution: The Pannoramic-X Micro-CT Scanner introduces 3D digital pathology, allowing virtual slicing and volumetric tumor assessment without physical sectioning.

• Challenge: Manual immunohistochemistry (IHC) interpretation is time-consuming, subjective, and prone to inter-observer variability.
• Solution: QuantCenter AI-powered analysis enables precise biomarker quantification, pattern recognition, and automated IHC scoring.

• Challenge: Research institutions struggle with large-scale digital slide management, remote access, and data sharing.
• Solution: SlideManager & SlideCenter provide centralized data management and cloud-based sharing, fostering collaboration across research centers.

• Challenge: Studying immune responses to tumors and infectious diseases requires multiplex imaging and high-throughput tissue sampling.
• Solution: TMA molmed & TMA Master II tissue microarray solutions accelerate large-scale biomarker studies, vaccine development, and personalized medicine research.

Optimizing Cancer Research

The Pannoramic Solutions for Cancer Research

№1. High-Throughput, High-Resolution Imaging

Best for 3D fluorescence imaging of tumor samples:

Research

Pannoramic Confocal Digital Scanner

The Pannoramic Confocal Digital Scanner combines confocal microscopy and digital pathology to deliver high-resolution, fluorescence, and 3D imaging for advanced research applications. Engineered for molecular pathology, neuroscience, cancer research, and biomarker discovery, it offers unprecedented image quality with minimal photobleaching and high-speed scanning, ensuring efficient, high-throughput analysis for research laboratories.

Real-World Application

A research team studying tumor microenvironments uses the Pannoramic Confocal scanner to create 3D reconstructions of tissue sections, identifying hypoxic tumor regions and immune cell interactions critical for cancer immunotherapy

Optimized for immunohistochemistry (IHC) and fluorescence research:

Research

Pannoramic Scan II Digital Scanner

Discover the features and benefits of the Pannoramic Scan II, a high-performance digital slide scanner offering world-class brightfield and fluorescent whole-slide scanning with robust, user friendly design.
Pannoramic Scan II Digital Scanner

Ideal for high-throughput cancer research (1200 & 480-slide capacity):

Research

Pannoramic 1000 Digital Scanner

Discover the Pannoramic 1000, the ultimate digital pathology scanner designed for large-scale laboratories, offering unparalleled speed, capacity, and image quality for seamless research excellence and effortless integration into existing workflows and eco-systems.
Research

Pannoramic 480 Digital Scanner

Discover the Pannoramic 480 Digital Scanner, a high-throughput digital pathology scanner designed for large-scale laboratories and research institutions. Learn about its advanced features, including 480-slide capacity, polarization technology, and optional automated water immersion system, delivering exceptional image quality, efficiency, and reliability for demanding digital pathology workflows.

Versatile solutions for biomarker discovery & multiplex imaging:

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Pannoramic 150 Digital Scanner

The Pannoramic 150 is a versatile digital pathology system designed for high-speed, high-resolution brightfield and fluorescence scanning. Equipped with a continuously moving stage, advanced Plan-Apochromat optics including a 10x objective, and a back-illuminated sCMOS camera, it delivers exceptional image clarity and efficiency for research applications.
Research

Pannoramic MIDI III Digital Scanner

The Pannoramic MIDI III is a versatile high-performance digital slide scanner designed for advanced pathology research. With 12-slide capacity, high-speed brightfield and fluorescent scanning, and exceptional resolution down to 0.10 um/pixel, it offers unmatched precision. Its compact design and automated workflows make it ideal for research applications, including biomarker analysis, multiplex imaging, and tissue morphology studies.
PANNORAMIC™ MIDI III

№2. AI-Driven Biomarker Quantification & Tumor Profiling

Software Solutions

QuantCenter

AI-powered biomarker analysis (IHC quantification, tumor grading)

SlideManager

Workflow management for research teams

SlideViewer & WebViewer

Remote collaboration & multi-slide visualization

Real-World Application

In a lung cancer clinical trial, researchers use QuantCenter’s HistoQuant module to analyze PD-L1 expression in IHC-stained sections, ensuring accurate patient stratification for immunotherapy.

№3. Tissue Microarray (TMA) for Large-Scale Biomarker Studies​

Key Challenges in Large-Scale Cancer & Infectious Disease Research

  • Manual biomarker validation is time-consuming & resource-intensive.
  • High-throughput screening of tissue samples is essential for vaccine & drug discovery.

What we offer

  • Automated microarraying of FFPE tissue samples, reducing hands-on time.
  • Supports multiplex biomarker analysis, enabling high-density tissue sampling.
  • Ideal for epidemiological studies, vaccine development, and precision medicine research.
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TMA Master II

As the smallest fully automated tissue microarray system on the market, the TMA Master II optimizes laboratory space without compromising performance. Its compact footprint allows integration into any lab environment, enhancing workflow efficiency. Advanced automation ensures precise tool size and block height measurements, enabling reproducible array construction. With the capability to generate up to four identical TMA blocks and a dedicated PCR cassette for streamlined molecular analysis, it surpasses conventional systems by combining superior accuracy, reliability, and space efficiency for high-throughput research applications.
tma master ll
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TMA Grand Master

The TMA Grand Master automates tissue microarray creation with exceptional speed, precision, and reliability. Designed for high-throughput institutions, it ensures accurate core selection and placement, reducing manual effort while increasing reproducibility. With advanced features and intuitive operation, it outperforms traditional methods and competing systems in efficiency and consistency, making it the ultimate tool for institutional pathology labs, biobanks, large research centers, and pharmaceutical companies.
tma grand master
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TMA molmed

Discover the TMA molmed, a fully automated, high-speed solution for tissue microarray creation and molecular sampling from FFPE and mega blocks. Combing precision microarraying with laser microdissection-like functionality, it enables highly accurate tissue extraction for advanced molecular applications, making it an essential tool for pathology, biobanking, and traslational research.
tma molmed

Real-World Application

A research team studying COVID-19 vaccine responses uses TMA molmed to extract tissue microarrays from infected lung biopsies, comparing cytokine expression across multiple patients.

№4. Pannoramic-X Micro-CT: A New Frontier in 3D Digital Pathology

Why 3D Imaging Matters in Cancer Research

  • Traditional histology provides only 2D snapshots of tumor architecture.
  • Understanding tumor morphology, lymphovascular invasion, and biomarker distribution requires 3D visualization.

Transforming Tumor Analysis

  • Non-destructive, whole-block 3D imaging of tumor samples.
  • Virtual slicing & staining, eliminating the need for sectioning.
  • AI-powered volumetric analysis for biomarker quantification & treatment response evaluation.

Real-World Application

A breast cancer research institute uses Pannoramic-X to analyze HER2 expression in full tumor blocks, uncovering previously undetected microinvasions, improving treatment decisions.

How This Solution Advances Cancer & Immunology Research

By combining WSI, AI-driven analysis, TMA technology, and micro-CT scanning, 3DHISTECH’s digital pathology ecosystem revolutionizes cancer research, accelerating breakthrough discoveries in oncology, immunology, and infectious diseases.

Who Benefits from These Solutions?

High-throughput biomarker validation & tumor profiling.

Faster drug discovery & clinical trials.

Multiplex biomarker analysis for immune response & vaccine research.

AI-driven quantitative pathology with WSI & microCT integration.

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