FISHQuant module

The FISHQuant lets you evaluate your FISH probes on MRXS digital slides. Choose between the built-in probes, modify them and add more! With the live preview you can see what and how will be detected. The program categorizes the nuclei to normal, abnormal and artifact groups. The detections can be visualized and rescored in the new classification gallery.

Sophisticated technologies used in Pannoramic digital slide scanners make it possible to scan FISH samples in great quality. All channels are handled and stored separately therefore you have all the spot information you need.

FISHQuant is able to score your digital slides with FISH probes on them. Select the appropriate probe from the built-in repository, select the channels you want to use and start classifying the cell nuclei based on the FISH spots.

Saved profiles can be used later. When analysing, FISHQuant saves all relevant data into CSV files. Other measurement visualization methods, like histograms, scatter plots, galleries and the measurement gallery are also available.

Quickmeasurement measurement mode

In many tumors, we encounter no specific deviations,  but some numerical deviations. The program enables a secondary (numeric aberration) measurement method that identifies the numerical deviations of the candidate genes.


New visual display method for the amplification probes, in which the amplification rate group
(gene / control mark =%) and the control gene marking numbers are displayed. It makes the reading of the aneoplid, polyploid populations amplification values easier.
Relationship between all populations, specific and non-specific (no difference) with one another to form easy to read display.




QuantCenter is the framework for 3DHISTECH image analysis applications

HistoQuant module

HistoQuant detects regions of interest based on the color and intensity information.